Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MANASLRHQLFEKLDQKCDQMVAIRRYLHENPELSFKETKTAAYISDFYKGKDCHVQTQ------FGGMNGVVVDIYGDKATDKPIKHIALRADFDALPIQEETGLSFASKT-AGVMHACGH-----D--AHTAYLLILAESLIELKSEFSGHIRILHQPAEEVPPGGAKAMIEAGCLDGIDAVLGIHVMSTMEEGTVQYHAGPIQTGRATFKVILQGKGGHGS-MPHRANDTIVAASSFVIAAQTIVSRRVNPFDTAVVTIGSFDGKGSANVIKDSVTLEGDVRVMSEETRGVVEEEFKRILDGIAQTYGVSYQLDYQNDYPVLV--NNSEVTQKVANSLKSVAIKEILDVIDCDPQTPSEDFAYYAQ-TIPACFFYVGAHEEGQPYYPHHHPKFQIAESSLMVSAKSMATAALAMLEEGE |
| 3GB0 Chain:A ((3-372)) | ---------------INQERLVNEFMELVQVDSETKFEAEICKVLTKKFTDLGVEVFEDDTMAVTGHGAGNLICTLPATK---DGVDTIYFTSHMDTVVPG----NGIKPSIKDGYIVSDGTTILGADDKAGLASMFEAIRVLKEKNI-PHGTIEFIITVGEESGLVGAKALDRERITAKYGYALDSDG----KVGEIVVA----APTQAKVNAIIRGKTAHAGVAPEKGVSAITIAAKAIAKMPLGRID-----SETTANIGRFEGGTQTNIVCDHVQIFAEARSLINEKMEAQVAKMKEAFETTAKEMGGHADVEVNVMYPGFKFADGDHVVEVAKRAAEK-I-GR-T--PSLHQSGGGSDANVIAGHGIPTVN--LAVGY-----EEIHTTNEKIPVEELAKTAELVVAIIEEVAK--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GB0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -119123 for 3013 contacts (-39.5/contact) +
2D Compatibility (PS) -37676 + (NN) -15125 + (LL) 3376
1D Compatibility (HY) -2800 + (ID) 2800
Total energy: -174148.0 ( -57.80 by residue)
QMean score : 0.457
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