Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MALFFTFLKVSQVIFLVLLIAYASFLVISLVIGGVHLYEKNERKKSLTRNKEKIPISIIVPAYNESTTIVSSIDSLLHLDYEAYEIIVVDDGSSDNTSDVLKEEFALMKISNTIDSIIATQTCKDVFQRQVGKVKLTLIVKENGGKGDALNMGINAANYDYFLCLDADSMLQVDSLSQISKSIQVDPTVIAVGGLVQVAQGVKIEQGKVASYRLPWRIIPCAQALEYDSSFLGARIFLDYLRANLIISGAFGLFKKDLVKAVGGYDTQTLG----EDMELVMKLHFFCRNNNIPYRICYETDAVCWSQAPT--NLGDLRKQRRR---- |
1QG8 Chain:A ((1-255)) | -----------------------------------------------------PKVSVIMTSYNKSDYVAKSISSILSQTFSDFELFIMDDNSNEETLNVIRPFLNDNRVRFYQS-----------------DISGVKERTEKTRYAALINQAIEMAEGEYITYATDDNIYMPDRLLKMVRELDTHPEK----AVIYSASKTYHLNDIVKETVRPAAQVTWNAPCAIDHCSVMHR----------------YSVLEKVKEKFGSYWDESPAFYRIGDARFFWRVNHFYPFYPLDEELDLNYITEFVRNLPPQRNCRELRESLKKLGMG |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QG8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -95472 for 1797 contacts (-53.1/contact) +
2D Compatibility (PS) -23455 + (NN) -1501 + (LL) 8956
1D Compatibility (HY) -8800 + (ID) 1850
Total energy: -122122.0 ( -67.96 by residue)
QMean score : 0.341
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