Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKTILLGLVGLSAMTLAACSNGQSSKETTWDNIKKDGVLKVATPATLYPTSYYDDHKKLTGYEIDMMKAIAKKLKIKVKFVEVGVAESFTSVDSGKVDVAVNNFDT-TPERLKKYNFSQPYKYSVGGMIVRADGSSKITAKDLSDWKGKKAGGGAGTQYMKIAKQQGAEPVIYDNVTNDVYLRDVSTGRTDFIPNDYYTQVIAVKYVTKQYPD--IKVKMGD-VKYNPTEQGIVMSKKDKSLKTKIDAAIKDMKKDGSLKKISEKYYAGQDLTKEPAGTDKIPVIKVK |
| 2YLN Chain:A ((49-278)) | -----------------------------LIERINNKGTVTVGTEGTYAPFTYHDKDGKLTGYDVEVTRAVAEKLGVKVEFKETQWDSMMAGLKAGRFDVVANQVGLTSPERQATFDKSEPYSWSGAVLVAHND--SNI--KSIADIKGVKTAQSLTSNYGEKAKAAGAQLVPVDG--LAQSLTLIEQKRADATLNDELA----VLDYLKKNPNAGVKI-VWSAPADEKVGSGLIVNKGNDEAVAKFSTAINELKADGTLKKLGEQFFGKDISVQ-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YLN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -49198 for 1882 contacts (-26.1/contact) +
2D Compatibility (PS) -24535 + (NN) -7184 + (LL) 3384
1D Compatibility (HY) -10400 + (ID) 3400
Total energy: -91333.0 ( -48.53 by residue)
QMean score : 0.423
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