Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKTKIIGVLGLGIFGQTLAQELSNFEQDVIAIDSNPENVQAVAEVVTKAAIGDITDLAFLKHIGISDCDTVIIATGNSLESSVLAVMHCKKLGVPQVIAKARNLVYEEVLYEIGADLVISPERESGQNVAANLMRNKITDVFQIESDISVIEFKIPKSWVGKTVEQLNIRHKFDLNLIGIRKAKNKPIDTEVPINSPLEEGIILVAIANSDAFQRYDYLGYFN
4J7C Chain:E ((7-184))
---KQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGANIQASTLTTLLLKELDIPNIWVKAQNYYHHKVLEKIGADRIIHPEKDMGVKIAQSLSDENVLNYIDLSDEYSIVELLATRKLDSKSIIDLNVRAKYGCTILAIKHHGDICLSPAPEDIIREQDCLVIMGHKKDIKRFENEGM----
General information:
TITO was launched using:
RESULT:
Template:
4J7C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -116797 for 1256 contacts (-93.0/contact) +
2D Compatibility (PS) -19158 + (NN) -5097 + (LL) 516
1D Compatibility (HY) -16800 + (ID) 2800
Total energy: -160136.0 ( -127.50 by residue)
QMean score : 0.580
(partial model without unconserved sides chains):
PDB file :
Tito_4J7C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4J7C-query.scw
PDB file :
Tito_Scwrl_4J7C.pdb
: