Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQLNQRQERIIDIIKQFQPITGELIAEKLGVTRAALRSDLAVLSMLGIIDAKPKVGYFYLGQYHASIGTSHFEKMTVSEIMGI-PLTVHQKDSVYDVIVHIFMEDAGCAFILDDDDFLCGVVSRKDLLKTSIGGGDLSKMPIGMVMTRMPHVTTVLENESLFAAADKLVSRKVDSLPVVRHDKQYPEKFKVIGKLSKTILASLFLEIRDY
2O16 Chain:A ((5-137))
--------------------------------------------------------------------------IKVEDMMTRHPHTLLRTHTLNDAKHLMEALDIRHVPIVDANKKLLGIVSQRDLLAAQESSLQ-FETPLFEVMHT--DVTSVAPQAGLKESAIYMQKHKIGCLPVVA-KD------VLVGIITDSDFVTIAINLLEL
General information:
TITO was launched using:
RESULT:
Template:
2O16.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -84645 for 875 contacts (-96.7/contact) +
2D Compatibility (PS) -13111 + (NN) -3089 + (LL) 6800
1D Compatibility (HY) -5600 + (ID) 1450
Total energy: -101095.0 ( -115.54 by residue)
QMean score : 0.464
(partial model without unconserved sides chains):
PDB file :
Tito_2O16.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2O16-query.scw
PDB file :
Tito_Scwrl_2O16.pdb
: