Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNTWNELTVHVNREAEEAVSNLLIETGSQGVAISDSADYLGQEDRFGELYPEVEQSDMIAITAYYPDTLDIEAVKADLADRLANFEGFGLATGSVNLDSQELVEEDWADNWKKYYEPARITHDLTIVPSWTDYEAKAGEKIIKMDPGMAFGTGTHPTTKMSLFALEQVLRGGETVIDVGTGSGVLSIASSLLGAKDIYAYDLDDVAVRVAQENIDMNPGTENIHVAAGDLLKGVQ-QEVDVIVANILADILIHLTDDAYRLVKDEGYLIMSGIISEKWDMVRESAEKAGFFLETHMVQGEWNACVFKKTDDISGVIGG |
| 3CJT Chain:E ((52-254)) | ---------------------------------------------------------------------------------------------------EEVGDEDWLEAWRRDLKPA-LAPPFVVLAPWHTWEG--AEIPLVIEPGMAFGTGHAETTRLALKALARHLRPGDKVLDLGTGSGVLAIAAEKLGGKAL-GVDIDPMVLPQAEANAKRN--GVRPRFLEGSLEAALPFGPFDLLVANLYAELHAALAPRYREALVPGGRALLTGILKDRAPLVREAMAGAGFRPLEEAAEGEWVLLAYGR---------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3CJT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -116556 for 1741 contacts (-66.9/contact) +
2D Compatibility (PS) -22073 + (NN) -5854 + (LL) 6468
1D Compatibility (HY) -11600 + (ID) 3250
Total energy: -152865.0 ( -87.80 by residue)
QMean score : 0.519
|
|
|