Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKRIWYLIIIITVILGGLAMKNLFATTEASSRKQEQDRVVKYIKQHVELTNGDQIKKVEFIDFQKNEMTGTWGISTKINEQFSISFSEDRIGGKLRALGYQPNEIGFSKDINSNNQNVNDIEVIYMKEE |
2KJK Chain:A ((1-100)) | MVKVTYDGVYVLSVKEDVPAAGIL--------------------------HAGDLITEIDGQSFKSSQEFIDYIHSKKVGDTVKIKYKH---GNKNEEASIKLTAIDKKGTPGIGITLVDDLEHHHHHH- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KJK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 995 for 601 contacts (1.7/contact) +
2D Compatibility (PS) -9808 + (NN) 4220 + (LL) 2880
1D Compatibility (HY) -400 + (ID) 900
Total energy: -3013.0 ( -5.01 by residue)
QMean score : 0.079
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