Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKAISFQNVTKSFGPKKILNNVSFDLEENMIYGFVGPNGAGKTTTIKMILGLLKFDTGFITIFGKKVNFGRTDTN-----QLIGYLPDVPEYYDYMTALEYLDLCS----GLARSKHKLSNKELLRSVGLDDN-HQKIATYSRGMKQRLGLAQALVHDPKIIICDEPTSALDPKGRQDILDIISNLRGEK-TVIFSTHILSDVEKICDHVLVLTKCGIYSLEELKGKKSEENYSVRILIKVTKSEAKVLSHNYQIEKKDNEYALTLKGSKMDNKADLLAGFYQDLVSLKISPSAIEVIDNSLEELYLEVTK |
2OUK Chain:C ((22-242)) | LQMIDVHQLKKSFGSLEVLKGINVHIREGEVVVVIGPSGSGKSTFLRCLNLLEDFDEGEIIIDG--INLKAKDTNLNKVREEVGMVFQRFNLFPHMTVLNNITLAPMKVRKWPREKAEAKAMELLDKVGLKDKAHAYPDSLSGGQAQRVAIARALAMEPKIMLFDEPTSALDPEMVGEVLSVMKQLANEGMTMVVVTHEMGFAREVGDRVLFMD--GGYIIEEGKPEDLFDRPQHERTKAFLSKVF----------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2OUK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -149535 for 1669 contacts (-89.6/contact) +
2D Compatibility (PS) -22622 + (NN) -4378 + (LL) 4928
1D Compatibility (HY) -17200 + (ID) 3600
Total energy: -192407.0 ( -115.28 by residue)
QMean score : 0.510
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