Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRITIFCGASTGENPVYSEKTVALAQWMAQNKHSLVYGGGKVGLMGVMADTVIANGGYTTGVIPTFLRDREIAHENLSELIIVNNMPERKAKMMLLGDAFIALPGGPGTLEEISEVISWSRIGQNDNPCILYNVNGYFNDLKNMFDHMVGEGFLSLEDRENVLFSDDITEIEDFITNYKVPSTRQY
3SBX Chain:B ((16-182))
--VAVYCAAAP-THPELLELAGAVGAAIAARGWTLVWGGGHVSAMGAVSSAARAHGGWTVGVIPKMLVHRELADHDADELVVTETMWERKQVMEDRANAFITLPGGVGTLDELLDVWTEGYLGMHDKSIVVLDPWGHFDGLRAWLSELADTGYVSRTAMERLIVVDNLDDALQACAP---------
General information:
TITO was launched using:
RESULT:
Template:
3SBX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -115502 for 1361 contacts (-84.9/contact) +
2D Compatibility (PS) -18717 + (NN) -9882 + (LL) 832
1D Compatibility (HY) -12000 + (ID) 2700
Total energy: -157969.0 ( -116.07 by residue)
QMean score : 0.434
(partial model without unconserved sides chains):
PDB file :
Tito_3SBX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3SBX-query.scw
PDB file :
Tito_Scwrl_3SBX.pdb
: