Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----MSDAFADVAKMKKIKEDIKSHEGQ-MVELTLENGRKREKNKIGRLIEVYPSLFIVEYKDTAAVPGAIDNTYVESYTYSDILTEKTLIRYFDDESAE
2E12 Chain:A ((1-93))
MPKYAPHVYTEQAQIATLEHWVKLLDGQERVRIELDDGS-----MIAGTVAVRPT--IQTYRDEQEREGSNGQLRIDHLDASQEPQWIWMDRIVAVHPMP
General information:
TITO was launched using:
RESULT:
Template:
2E12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1179 for 563 contacts (-2.1/contact) +
2D Compatibility (PS) -9195 + (NN) -1533 + (LL) 560
1D Compatibility (HY) -1600 + (ID) 800
Total energy: -13747.0 ( -24.42 by residue)
QMean score : 0.264
(partial model without unconserved sides chains):
PDB file :
Tito_2E12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2E12-query.scw
PDB file :
Tito_Scwrl_2E12.pdb
: