Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------MFYTIEELVEQANS--QHKGNIAELMIQTEIEMTGRSREEIRYI-MSRNLEVMK--ASVIDGLTPSKSISGLTGGDAVKMDQYLQ--SGKTISDTTILAAVRNAMAVNELN-----------AKMGLVCATPTAGSAGCLPAVISTAIEKL-NLTEEEQLDFLFTAGAF-GLVI-GNNASISGAEGGCQAEVGSASAMAAAALVMAA-------------------GGTPFQA------SQAIAFVIKNML---GLICDPVAGLVEVPCVKRNALGSSFALVAADMALAGIESQIPVDEVIDAMYQVGSSLPTAFRETAEGGLAATPTGRRYSKEIFGE--- |
| 4PEI Chain:A ((7-355)) | QIQHIAIVGSVHGKYREMYRQLSEYEKSTGKEISFVICTGDMQTLRYEADLVYLKVPPKYKQMGDFHLYYEGKEKAPYLTLFIGGNHESSNVLLHLYNGGFVCFNMYYLGVCSCININGLRIVGVSGIYKSFDEKKPYTYPPSPNDVVSLFHTRNYVIQMLSNLSQSSQIDISLSHDWPQGIVMKGNYKQLYRFQPGFKKD-GASLGSPINKVILNTLKPKYWISGHMHCEYHAEEGPTHFIALGKIGYKNAISYLDLPLKQKTDLEYDKDWVCNLIMTWPAFSNKAQFPDLSYSISELLSKRTKELDKKIIELWEKYIGLKIIYDS--DTFDIQFTSRRFYIEKIYNELNI |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PEI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -63047 for 2052 contacts (-30.7/contact) +
2D Compatibility (PS) -29670 + (NN) 1286 + (LL) 388
1D Compatibility (HY) -12800 + (ID) 2350
Total energy: -106193.0 ( -51.75 by residue)
QMean score : 0.109
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