Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNKKWQWLVYGWKLIILTLLTAAVFSYAMFQGGFVSWFLFYAFLPFVLYAGLLALYPLRSFQASRQMDKTQLHAGDRLGVTVTLRRKLPFPLMYMVIEDCLPEGIESLNRDGAAAKR--LVFPWFKRSMTMSYELARVPRGEHHFHSVRVRTGDVLGLIEKTAFFELDDTLFVYPFYQRFSYQVNERHQEDGVSGSSPIHQHHSSVAASVRNYQPGDRFAALDWKTSARRSQLMTKEFEPSRSKNLFLLMDRFSSDAFEEVVSVTASILHSVLKNGAGAGLASIGKEKNIFPIQEGDQHFKHMLRHLAIAHCDAADPISRYAREELGKPSVRQADQVVVTGQLTEDMLHLAEIGGGRVTVILAKEKDAELSQAENVMIERMMKRQIRVRIMRGGRVSRVV
2Q3Z Chain:A ((589-665))--------------------------------------------------------------IKIRIL-GEPKQKRKLVAEVSLQNPLPVALEGCTFTVEGAGLTEE------QKTVEIPDPVEAGEEVKVRMDLVPLHMGLHKLV--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2Q3Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 266 -23734 -89.22 -316.45
target 2D structure prediction score : 0.25
Monomeric hydrophicity matching model chain A : 0.51

3D Compatibility (PKB) : -89.22
2D Compatibility (Sec. Struct. Predict.) : 0.25
1D Compatibility (Hydrophobicity) : 0.51
QMean score : 0.218

(partial model without unconserved sides chains):
PDB file : Tito_2Q3Z.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2Q3Z-query.scw
PDB file : Tito_Scwrl_2Q3Z.pdb: