Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNTLTVKDIKDRLQEVKDAQDPFIAQCENDPRKSVQTLVEQWLKKQAKEKALKEQWVNMTSYERLARNKGFRLIAGVDEVGRGPLAGPVVASAVILPEE----CEILGLTDSKKLSEKKREEYYELIMKEALAVGIGIVEATVIDE----INIYEASKMAMVKAIQDLSD------TPDYLLVDAMTLP--------------------LDTAQASIIKGDAKSVSIAAGACIAKVTRDRMMSAYAETYPMYGFEKNKGYGTKE-HLEAL----AAYG-PTELHRKTFAPVQSFR
1EKE Chain:A ((2-218))------------------------------------------------------------------------IIIGIDEAGRGPVLGPMVVCAFAIEKEREEELKKLGVK---ELTKNKRAYLKKLLENL-GYVEKRILEAEEINQLMNSINLNDIEINAFSKVAKNLIEKLNIRDDEIEIYIDACSTNTKKFEDSFKDKIEDIIKERNLNIKIIAEHKADAKYPVVSAASIIAKAERDEIIDYYKKIYGDI----GSGYPSDPKTIKFLEDYFKKHKKLPDIARTHWKTCKRI-


General information:
TITO was launched using:
RESULT:

Template: 1EKE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 874 -107729 -123.26 -619.13
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.71

3D Compatibility (PKB) : -123.26
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.381

(partial model without unconserved sides chains):
PDB file : Tito_1EKE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1EKE-query.scw
PDB file : Tito_Scwrl_1EKE.pdb: