Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFNKMLVAIDGSDMSAKALDAAVHLAKEQQAELSILHVGREAVVTTSSLTGIVYVPE--HFIDEIRNEVKKEGLKILENAKEKAAEKGVQAETIYANGEPAHEILNHAKEKGVSLIVVGSRGISGLKEMMLGSVSHKVSQLSTCPVLIVR
1MJH Chain:A ((4-158))MYKKILYPTDFSETAEIALKHVKAFKTLKAEEVILLHVIDEREIK------------VEEFENELKNKLTEEAKNKMENIKKELEDVGFKVKDIIVVGIPHEEIVKIAEDEGVDIIIMGSHGKTNLKEILLGSVTENVIKKSNKPVLVVK


General information:
TITO was launched using:
RESULT:

Template: 1MJH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 593 -3455 -5.83 -25.40
target 2D structure prediction score : 0.73
Monomeric hydrophicity matching model chain A : 0.76

3D Compatibility (PKB) : -5.83
2D Compatibility (Sec. Struct. Predict.) : 0.73
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.613

(partial model without unconserved sides chains):
PDB file : Tito_1MJH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1MJH-query.scw
PDB file : Tito_Scwrl_1MJH.pdb: