Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKVRFLQISDLHFQFQNYD-------------TIVMRDKLLDFIEVLRRESDFDFLLLTGDIAHKGDVYNEDVKEYLNGIIKSMGLSKNNVHLVPGNHDISRDMTRTLLIDSIMKSPNPSEMLDKLDQKATNILVEGQRKFFDFYEDFMGVKYPEEDLHFLYQ-SEKYNVLSINTCLLSDKKG-------------------------------------EEGTLLTAQMKLYKAIRKMNKEKNKGKVLNIAIGHHTLGCIES------SERESIKAHFDDY-FIDLYLAGHVHDSSFNITANTNENPFLELVSGAIIKDEYATPEFISVDVNLDNGETEVTYYIWNTEYKYWSKNNQGGRRLQEGKLNYKINRLESLIEKEIEDNDDKIDEDEFKSFIIDFHEYRESYKTFTSNFDNQIGLDKKFYDMKSGETFKRKFDSYSEYFGVINHIMDSTSYVSADKKELIAETIVDKYLEFHNQYNNGDEIFVKIVNEIYLECHSVLPYSKALTKKYIKILTCWCIYECEIFNDNKRSVKND
2NXF Chain:A ((5-305))-VFTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWR----RERVQCVVQLGDIIDGHNRRRDASDRALDTVMAELDACSVDVHHVWGNHEFYNFSRPSLLS------------------SRLNSAQ--------GSDLIG-----DDIYAYEFSPAPNFRFVLLDAYDLSVIGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDH-KQERVLIFSHLPVHPCAADPICLAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCT-DS--SGAQHI-TLEGVIETPPHSHAFATAYLYEDR-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2NXF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1178 -17346 -14.72 -73.19
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : -14.72
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.461

(partial model without unconserved sides chains):
PDB file : Tito_2NXF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2NXF-query.scw
PDB file : Tito_Scwrl_2NXF.pdb: