Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLTLPDDRAPTGLPDPGIEALAHTKIASTISTVVADGYAVVLSTADIANSLLANAIGYPIAASVALVTPAAGANSSCWPADPSQHHRIAESRACA
2LLR Chain:A ((1-22))
----------------------------------------------------------------------RGCYTRCWKVGRNGRVCM---RVCT
General information:
TITO was launched using:
RESULT:
Template:
2LLR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2471 for 79 contacts (-31.3/contact) +
2D Compatibility (PS) -2091 + (NN) 854 + (LL) 4880
1D Compatibility (HY) -1600 + (ID) 250
Total energy: -678.0 ( -8.58 by residue)
QMean score : 0.311
(partial model without unconserved sides chains):
PDB file :
Tito_2LLR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LLR-query.scw
PDB file :
Tito_Scwrl_2LLR.pdb
: