Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAPFGFTPKARHNRGVALRSTYRLDGWVMGPVDKEGWGLSYVFAQPSVLAAAATDLAGIGSAINQATAAVAAPTTGLAAAAADEVSTALATLFGAYGQQFQAISAQVAAFHNEFTQRLAAAANAFVNAEATNTSALVQEATAGLFKPTSPPVLPPMFNQNTAIIMGGTGSPIPT-----PSYVNAITTLFIDPVVSNPVVKALVTPEELYPITGVKSLPFQTSVQLGLQILDGAIWEQI--NAGNHVTVFGYSQSAVIASLEMQHLISLGPNAPSPSQ-LNFILIGNEMNPNGGILARIPGLNVTTLGLPFYGATPDNPYPTTTYTLEYDGFADFPRYPLNVLSDINAVFGILTVHTTYADLTPAQIASATQLPTQGTTSNTYYIIETEHLPLLAPLRAIPVIGPPLAALVEPNLEVIVNLGYGDPRFGYSTSPANVPTPFGLFPDVPASVVADALVAGTQQGVNDFMVELPAALNTLPQTPMPAFPPYVPTLLPPPPPPQPATLINIADTFASVVSTGYSILLPTADLGLAFVTILPAYDLTLFVNQLAAGNLRAAIELPLAATIGLAALGGMIEFIAIVVTLADITQQLQSFSI |
| 4PSC Chain:A ((79-236)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------CGDVTVLFARGTCDPGNVGVLVGPWFFDSLQTA-LGS--RTLGVKGVPYPASVQD-------FLSGSVQNG-INMANQIKSVLQSCPNTKLVLGGYSQGSMVVHNAASNLDAA-----TMSKISAVVLFGDPYYGKP-----VA-------NF--------DAAKTLVVCHDGDNICQGGDI-------------ILLPHLTYAEDA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PSC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -59887 for 1218 contacts (-49.2/contact) +
2D Compatibility (PS) -16242 + (NN) -9982 + (LL) 27936
1D Compatibility (HY) -5200 + (ID) 1500
Total energy: -64875.0 ( -53.26 by residue)
QMean score : 0.342
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