Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGREYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAANAARVSHALDTINAPIRTLLGRAPLSPNGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPE-YVTDINKAFIQTLFPGAVSQGLF--TPEQFWPVTPDLGNLTFN--QSVTEGVALLNTAVNNQL--ALDNKVVAFGYSQSATIINNYINSLMAMGSPNPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPYPTHIYTAQYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNTQYYMFLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYADYGPGGNYADIPTPAGLFSIPNPFAVTYYLIKGSLQAPYGAIVEIGVEAGLIGPEWFPDSYPWVPSINPGLNFYFGQPQVTLLSLMSGGLGNILHLIPPPVFT |
| 4OYL Chain:A ((16-179)) | ----------------------------------------------------------------------------------------------------------------------------------------ACPDAILIFARGSTEPGNMGITVGPALA-NGLESHIRNIWIQGVGGPYDAALAT--------NFLPRGTSQANIDEGKRLFALANQKCPNTPVVAGGY-QGAALIAAAVSELSGA--VKEQVKGVALFGYTQNLQNR--G---G--IP--------NYP---RERTKVFCNVGDAVCTGTLI-------------ITPA-LSYTIE----------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4OYL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -67688 for 1283 contacts (-52.8/contact) +
2D Compatibility (PS) -16907 + (NN) -16168 + (LL) 18712
1D Compatibility (HY) -1200 + (ID) 1200
Total energy: -84451.0 ( -65.82 by residue)
QMean score : 0.347
|
|
|