Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTTSTTLGGYVRDQLQTPLTLVGGFFRMCVLTGKALFRWPFQWREFILQCWFIMRVGFLPT-IMVSI-------PLTVLLIFTLNILLAQFGAADISGSGAA-IGAVTQLGPLTTVLVVAGAGSTAICADLGARTIREEIDAMEVLGIDPIHRLVVPRVL-------ASMLVATLLNGLVITVGLVGGFLFGVYLQNVSGGAYLATLTLITGLPEVVIATIKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETVVLCVIALFAVNVILTTIGVRFGTGR |
| 1G19 Chain:A ((1-269)) | MTQTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVA--LGIGGLPRGRVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQPDTGEQALEIADMLIRS--GALDIVVIDSVAALVPRAELEGEHVGLQARLMSQALRKMTGALNNSGT--TAIFINQLTGGKALKFYASVR-MDVRRVETLKD-----------------------GTNAVGNRTRVKVVKNKCLAPFKQAEFDILYGKGI |
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General information:
TITO was launched using:
| RESULT:
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Template: 1G19.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -267534 for 1874 contacts (-142.8/contact) +
2D Compatibility (PS) -24075 + (NN) -613 + (LL) 1772
1D Compatibility (HY) -1200 + (ID) 2300
Total energy: -293950.0 ( -156.86 by residue)
QMean score : 0.238
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