Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMSVLARMRVMRHRAWQGLVLLVLALLLSSCGWRGISNVAIPGGPGTGPGSYTIYVQMPDTLAINGNSRVMVADVWVGSIRAIKLKNWVATLTLSLKKDVTLPKNATAKIGQTSLLGSQHVELAAPPDPSPVPLKDGDTIPLKRSSAYPTTEQTLASIATLLRGGGLVNLEGIQQEINAIVTG-RADQIRAFLGKLDTFTDELNQQRDDITRAIDSTNRLLAYVGGRSEVLNRVLTDLPPLIKHFADKQELLINASDAVGRLSQSADQYLSAARGDLHQDLQALQCPLKELRRAAPYLVGALKLILTQPFDVDTVPQLVRGDYMNLSLTLDLTYSAIDNAFLTGTGFSGALRALEQSFGRDPETMIPDIRYTPNPNDAPGGPLVERGNRQC |
| 2GTS Chain:A ((4-80)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VQMDTEEVREFVGHLERFKELLREEVNSLSNHF---HNLESWRDARRDKFSEVLDNLKSTFNEFDEAAQEQIAWLKERIR---------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GTS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -9004 for 374 contacts (-24.1/contact) +
2D Compatibility (PS) -7894 + (NN) 1971 + (LL) 18636
1D Compatibility (HY) 4800 + (ID) 200
Total energy: 8309.0 ( 22.22 by residue)
QMean score : 0.465
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