Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTVVVEKTPTTLPQATPNGAAPWHVRAGAFAIDVLPGLAVAATMALTALTVPPGSAWRWLCACLLGLTILLLAVNRLLLPTITGWSLGRALTGIRVVRRDGSAIGPWRLLVRDLAHLVDTLSLFVGWLWP--LWDSRRRTFADLLLRTEVRRVEPVQRPAVIRRLTAAVALAAAGACASATAVGAAVVYVNEWQTDHTRAQLATRGPKLVVDVLSYDPETVQRDFERARSLATDRYRPQLSIQQDSVRESGP---VRNQYWVTDSAVLSATPAQATMLLFMQGERGTPPNQRYIQSTVRAIFQKSRGQWRLDDLAVVMKPRQPTGEK |
| 4MT5 Chain:A ((0-183)) | --------------------------------------------------------------------------MQTAYVKYVDDTTGETLRQDDLHGYTDETI-PYSTAEGIKKYEGDGYVLVSDGFKPGTKFGVGTPTY-EVHFKHGMTHTDATDKNAEQKTVTETIHYVDENNQTVQPDSTTAVTFKRGYTTDNVTGKVVSYDPWTV-----DGNQADSKTFAAVPSPAVEGYTPNHQQINEFTVTPDSKDIVKTVVYVGDP-------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MT5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -12749 for 1134 contacts (-11.2/contact) +
2D Compatibility (PS) -18872 + (NN) -5696 + (LL) 10964
1D Compatibility (HY) 11600 + (ID) 350
Total energy: -15103.0 ( -13.32 by residue)
QMean score : 0.001
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