Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTVHSSIDQHPDLLALRASFDRAAESTIAHFT-FGLALLAGLYVAASPWIVGFSATRGLPTCDLIVGIAVAYLAYGFASALDRTHGMTWTLPVLGVWVIFSPWVLPGVAVTA-GMMWSHIIAGAVVAVLGFYFGMRTRAAANQG
2JHB Chain:A ((1-143))
-GSMPRVVPDQRSKFENEEFFRKLSRECEIKYTGFRDRPHEERQTRFQNACRDGRSEIAFVATGTNLSLQFFPASWQGEQRQTPSREYVDLEREAGKVYLKAPMILNGVCVIWKGWIDLHRLDGMGCLEFDEERAQQEDALAQQ-
General information:
TITO was launched using:
RESULT:
Template:
2JHB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -120728 for 1050 contacts (-115.0/contact) +
2D Compatibility (PS) -15011 + (NN) 1140 + (LL) 36
1D Compatibility (HY) 2800 + (ID) 750
Total energy: -132513.0 ( -126.20 by residue)
QMean score : 0.199
(partial model without unconserved sides chains):
PDB file :
Tito_2JHB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JHB-query.scw
PDB file :
Tito_Scwrl_2JHB.pdb
: