Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSGNEVHPDLRRIAVVTPRQLVGPRTLPVMRALIVVAGLRMSRTPPDIEVLTLESGVGVRLYRPAGSNEPAPALLWIHAGGYVMGTAQQDDRLCLRFSSRLGITVASVDYRLAPENPYPAALGDCYSALTWLASLP---AVDPARVAIGGASAGGGLAAALALLARDRGGITPA--FQLLVYPMLDDRPSIAP----ANPHYRLWNGRANRFGWRAYLGDADAR---VAVPGR--RDDLGGLAPAWIGVGTHDLLHDEDLAYAERLTAAGVPCQVEVVEGAFHGFDRVAPNVGVSQRFFTSQCNSLRAALALSNRT |
4OB6 Chain:A ((79-308)) | --------------------------------------------------------IKLQVVRPANVKGELPVFMFFHGGGWVLGDFPTHQRLIRDLVVGSGAVAVYVDYTPSPESHYPTAINQAYAATQWVAEHGKEIGVDGKRLAVAGNAVGGNMAAVVALKAKEAG--TPALRFQLLLHPVTDASFETASYKQFADGHF-LTTGMMKWF-WDNYTTDAKAREQIYASPLRASSEQLKGLPPALVQTAEFDVLRDEGEAYARKLNAAGVTVTSVRYNGMIHDYGLLNP-------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4OB6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -141240 for 1818 contacts (-77.7/contact) +
2D Compatibility (PS) -23770 + (NN) -15872 + (LL) 5720
1D Compatibility (HY) -13200 + (ID) 4050
Total energy: -192412.0 ( -105.84 by residue)
QMean score : 0.515
|
|
|