Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKYLDVD--GIGQVSRIGLGTWQFGSREWGYGDRYATGAARDIVKRARALGVTLFDTAEIYGL-------GKSERILGEALGD--DRTEVVVASKVFPVA------------PFPAVIKNRERASARRLQLNRIPLYQIHQPNPVV-----------------PDSVIMPGMRDLLDSGDIGAAGVSNYSLARWRKADAAL---G-RPVVSNQVHFSLAHPDALEDLVPFAELENRIVIAYSPLAQGLLGGKYGLENRPGGVRA-LNPLFGTENLRRIEPLLATLRAIAVDVDAKPAQVALAWLISLPGV-VAIPGASSVEQLEFNVAAADIELSAQSRDALTDAARAFRPVSTGRFLTDMVREKVSRR |
| 1LQA Chain:A ((1-342)) | MQYHRIPHSS-LEVSTLGLGTMTFGEQ-------NSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPETQGLTETYVGNWLAKHGSREKLIIASKVSGPSRNNDKGIRPDQALDRKNIREALHDSLKRLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVSLLDTLDALAEYQRAGKIRYIGVSNETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELLAYSCLGFGTLTGKYLNGAKPAGARNTLFSRFTRYSGEQTQKAVAAYVDIARRHGLDPAQMALAFVRRQPFVASTLLGATTMDQLKTNIESLHLELSEDVLAEIEAVHQVYT------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LQA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -138049 for 2509 contacts (-55.0/contact) +
2D Compatibility (PS) -31772 + (NN) -13207 + (LL) 1556
1D Compatibility (HY) -12400 + (ID) 4150
Total energy: -198022.0 ( -78.92 by residue)
QMean score : 0.540
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