Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTDEDLIRAALAVAATAGPRD-VPVGAVVVGADGTELARAVNAREALGDPTAHAEILAMRLAAGVLGDGWRLEGTTLAVTVEPCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRDRRLNHRPEVRGGVLARECAAPLEAFFARQRLG
2A8N Chain:B ((4-141))
---RTHFMELALVEARSAGERDEVPIGAVLV-LDGRVIARSGNRTRELNDVTAHAEIAVIRMACEALGQ-ERLPGADLYVTLEPCTMCAAAISFARIRRLYYGAQDPKGGAVESGVRFFSQPTCHHAPDVYSGLAESESAEIL----------
General information:
TITO was launched using:
RESULT:
Template:
2A8N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -110049 for 1199 contacts (-91.8/contact) +
2D Compatibility (PS) -15023 + (NN) -8089 + (LL) 948
1D Compatibility (HY) -10000 + (ID) 3150
Total energy: -145363.0 ( -121.24 by residue)
QMean score : 0.512
(partial model without unconserved sides chains):
PDB file :
Tito_2A8N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2A8N-query.scw
PDB file :
Tito_Scwrl_2A8N.pdb
: