Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSRTLATVMLAGGLLAAGQAVAEDHDMTPTHETDSGPLLWHNESLTYLYGKNFKINPPIQQTFTLEHASG--WTWGDLFIFFDQINYNGKEDASNGKNTYYGEITPRLSFGKLTGADLSFGPVKDVLLAGTYEFGEGDTEAYL-LGPGFDLAIPGFDYFQLNFYYRKPDGNRVRAGAWQITPVWSYTIPVGNSDILIDGYMDWVINNKSASTSRRNQSDYHANLHFNPQVKYDLGKALGYEPKHLYVGLEYDYWSDKYGVKDSQYFTTDQNTASFLVKYHF- |
1S2K Chain:A ((1-206)) | ----------------------------TVESNWGGAILIGSD------------FDTVSATANVPSASGGSSAAGTAWVGIDGDTCQTA-----------------------------------ILQTGFDWYGDGTYDAWYEWEVSIT--ISEGDSIQMSVTATSDTSGSATLENLTTGQKVSKSFSNESSGSLCRTNAEFIIEDFEECNSNGSDCEFVPFASFSPAVEFT---DCSVTSDGESVSLDD---AQITQVIINNQDVTDCSVSGTTVSCSYV |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1S2K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -54733 for 1629 contacts (-33.6/contact) +
2D Compatibility (PS) -20485 + (NN) -3877 + (LL) 4440
1D Compatibility (HY) -4400 + (ID) 1500
Total energy: -80555.0 ( -49.45 by residue)
QMean score : 0.105
|
|
|