Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRLERIARISDGFQSMAREQNLSLSERYHKQLRRLEKVARISDRYQQMMRDLNLALKEASIR--------DPLTGLPNRRMLLERLREENERSQRHGQSYVLAMLDVDFFKQVNDTWGHDSGDRVLVEIARAMESELREYDLCGRWGGEEFLLLLPQTRLQDAGPVLERVRDSVRTLAVRVGTEALSVTASVGVTEHRIGETYSQTVNRADAALLDAKRSGRDKCVFAALPPLPAPSRPAPAR
4H54 Chain:B ((104-286))
------------------------------------------DAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEP--LNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDEQNVINRVL-----
General information:
TITO was launched using:
RESULT:
Template:
4H54.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -75807 for 1278 contacts (-59.3/contact) +
2D Compatibility (PS) -19395 + (NN) -9424 + (LL) 4092
1D Compatibility (HY) -12000 + (ID) 2900
Total energy: -115434.0 ( -90.32 by residue)
QMean score : 0.488
(partial model without unconserved sides chains):
PDB file :
Tito_4H54.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4H54-query.scw
PDB file :
Tito_Scwrl_4H54.pdb
: