Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------MKNIDKTLSPAWSRPLPRLAPPPSA---AFARRLGDGLLPW-----------LLPLGLALLWWVASHRHWMSAQVL---------------PTPELVWQSAREL-LAGELWSELAISLRRLAWGLLAGVASGAALGAWLGFSPRAERLV-----FPTFSA--LAQIPTLAWIPLFMLFFGI-----------GELLK--LVVLVKAVVVPVTIHTLVGVRDAQPKLREAAAVLRLPPRLLVWRLILPAALPAFLTGLRLALAQGW------TSLLAVELLASSEGI---GYLMVQGRQLFMLDIVFVCILIIGLVGVGMDRAIQWLDRRLLHWPQAATGEFRRRPPGRGWQRLQVWLPPLALLLLWQSASSAEWVDPAILASPLEVARATWSGALDGSLPGALFDSLKR-----------TLGGLLLGGGLGFLGGL-------------------LLGLWRPAE-RFFGPTFAALRQVAIFAWVPLLTAWFGLGEPAKLTFVAIAAFFPLL--LATQRGIASLPPSLGEAARVLRLGPWRRLLRLVLPGAAPSVFAGLRLALI--YAWLG-TIGAEYFMPSDGGIGSLMIGAQQLF-RMDLIGAGMLLVGLTGALLNAL-------GQRIEARATRWRHA------ |
| 4UIR Chain:A ((2-646)) | NPITSKFDKVLNASSEYGHVNHEPDSSKEQQRNTPQKSMPFSDQIGNYQRNKGIPVQSYDNSKIYIIGSGIAGMSAAYYFIRDGHVPAKNITFLEQLHIDGGSLDGAGNPTDGYIIRGGREMDMTYENLWDMFQDIPALEMPAPYSVLDEYRLINDNDSNYSKARLINNKGEIKDFSKFGLNKMDQLAIIRLLLKNKEELDDLTIEDYFSESFLKSNFWTFWRTMFAFENWHSLLELKLYMHRFLHAIDGLN---DLSSLVFPKYNQYDTFVTPLRKFLQEKGVNIHLNTLVKDLDIHINTEGKVVEGIITEQDGKEVKIPVGKNDYVIVTTGSMTEDTFYGNNKTAPIIGIDNSTSG-----QSAGWKLWKNLAAK-----------SEIFGKPEKFCS--NIEKSAWESATLTCKPSALIDKLKEYSVNDPYSGKTVTGGIITITDSNWLMSFTCNRQPHFPEQPDDVLVLWVYALFMDKEGNYIKKTMLECTGDEILAELCYHLGIEDQLENVQKNTIVRTAFMPYITSMFMPRAKGDRPRVVPEGCK--NLGLVGQFVE-TNNDVVFTMESSVRTARIAVYKLLNLNKQVPDINPLQYDIRHLLKAAKTLNDDKPFVGEGLLRKVLKGTYFEHVLPAGEEHESFIAEHVNKFREWVKGIRG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UIR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -358898 for 3945 contacts (-91.0/contact) +
2D Compatibility (PS) -52874 + (NN) -3607 + (LL) 2156
1D Compatibility (HY) -19200 + (ID) 4750
Total energy: -437173.0 ( -110.82 by residue)
QMean score : 0.127
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