Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKALTSSLLGLFAAPVLAGLLGAYVPLASAAPPKEIRIAVPDVSAGSSHSGGGVVDVLYTRQLLEKEFANDGIAVKWSFFKGAGPVVNEAFANGQVDFAYLGDLAAIIG-KSGG-LDSRLLAATARGVNHYLGVQPGSGIKTLEDLKGKRVGIFRG-------TAS-------------------QLSFDNALASVGLSEKDLKVINLDFS--------------------------AALSALAARQIDATWGLAG-LFALRDRGLAEIPLSTRDLNGAGTLQALLVGSGAFVDAHPDITERLLKVQLQAQDWLAREENRDAYIELVSKQASYPVVILQSEYRGRKLGDALSPRLDADFLGRLDASIQAAKRFGLIRREFSAEQWAAPELLEAAGKLAKAKAVAQAAE |
| 2DE3 Chain:A ((31-363)) | ----------------------------------------------------NALLTASESGFLD----AAGIELDVLSGQ-QGTVHFTYDQPAYTRFGGEIPPLLSEGLRAPGRTRLLGITP-L-LGRQGFFVRDDSPITAAADLAGRRIGVSASAIRILRGQLGDYLELDPWRQTLVALGSWEARALLHTLEHGELGVDDVELVPISSPGVDVPAEQLEESATVKGADLFPDVARGQAAVLASGDVDALYSWLPWAGELQATGA-RPVVDLGLD-ERNAYASVWTVSSGLVRQRPGLVQRLVDAAVDAGLWAR--DHSDAVTSLHAANLGVSTGAVGQGFGADFQ-QRLVPRLDHDALALLERTQQFLLTNNLLQEPVALDQWAAPEFLNNSLNR----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DE3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -130545 for 2195 contacts (-59.5/contact) +
2D Compatibility (PS) -30133 + (NN) -14702 + (LL) 4808
1D Compatibility (HY) -4400 + (ID) 2600
Total energy: -177572.0 ( -80.90 by residue)
QMean score : 0.434
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