Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKHHYRLPLRRTPPGGSDYALALLLALGGALPASAADAPAPAEEAPPLAGSAPAKADTALGKVTVTARRREEDSQKVPTPITVLGGETLEAQRISRVQDLQQVLPSVNVAYIHA-RQSSVAVRGIGNNPASDGLEGSAGIYLDNVYLGRPG----MAVFDLLDIEQLELLRGPQGTLFGKNTTAGVLNISTRAPTFTAE------RTVEVSGGQDGY-FQGRGTVSGPLGETLAGRLSAYRTRDDGYIKNIHDDNYLNGGERQGARGQLLFEPNEDFSLRWIADYNEEDSSNGSMVVYGGAERFWQRAALVGASPLRDPQRRKVNINGRQHVSVHQGGSSLEANWNL--AGGYRLTSISAYRYWHFTPANDEQLNVSAINDTGVEVHDRQFSQEIRLASP----TGGAFDYVVGAYAFRQNLGNKTFTSYGPLADLYLLGANLGALNDTYSKANGKIETDSFALFAQGTWHLTE-RLDFTAGLRGTYEEKNAKVERFAPLGGAAVGGVGAAVRNGQLGAYDSGDLSQYNFAPSALLSLSYQFSDDLLGYASLSHGEKSGGVNLAVGSAPS---------AGADSLLVGPERANDAELGLKSTLF-----DRRLLLNANLFWTGIHGYQATTLYQAPGSTQLVQVLANAGSVRSRGLEFEATALPLRGLTLNFNGSYNDVTYLSFKDAPCPAEVSTRPGAPSSCDLTGQRVVGASKWIANLNGEYQWRLDDRFQPYVSASYAYRSAAEGTLDNSDLSKIDGYALVNLAAGLRSDLGDGQLDTSVWLKNAFDKDYYLSAFASINGSYTASVGQPRTLGVSLRYDF |
| 3FHH Chain:A ((2-640)) | ------------------------------------------------------------ETMTVTATGNARSSFEAPMMVSVIDTSAPENQTATSATDLLRHVPGITLDGTGRTNGQDINMRGYDHR--------GVLVLVDGIRQGTDTGHLNGTFLDPALIKRVEIVRGPSALLYGSGALGGVISYDTVDAKDLLQEGQSSGFRVFGTGGTGDHSLGLGASAFGRT-ENLDGIVAWSSRDRGDLRQSN-GETAPNDESINNMLAKGTWQIDSAQSLSGLVRYYNNDARE--PKNPQ-TVEA------S--ES------SNP--M-VD-RSTIQRDAQLSYKLAPQGNDWLNADAKIYWSEVRINAQ--------------EYREQITKGARLENRSTLFADSFASHLLTYGGEYYRQEQGSH-------------------------TTGFPQAKIDFSSGWLQDEITLRDLPITLLGGTRYDSYRGSSDG-----------------------------YKDVDADKWSSRAGMTINPTNWLMLFGSYAQAFRAPTMGEMYNDSKHFSIGRFYTNYWVPNPNLRPETNETQEYGFGLRFDDLMLSNDALEFKASYFDTKAKDYISTTVDFA----AATTMSYNVPNAKIWGWDVMTKYT-TDLFSLDVAYNRTRGKDTD----------------------TGEYISSINPDTVTSTLNIPIAH---SGFSVGWVGTFADRSTHIS--S---KQPGYGVNDFYVSYQGQQALKGMTTTLVLGNAFDKEYWSPQ---------GIPQDGRNGKIFVSYQW |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FHH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 85301 for 5097 contacts (16.7/contact) +
2D Compatibility (PS) -58827 + (NN) 6003 + (LL) 5620
1D Compatibility (HY) -1200 + (ID) 4350
Total energy: 32547.0 ( 6.39 by residue)
QMean score : 0.069
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