Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTSLMLEEALSAATVASRQLAVLDACLPALGQRLREVDPNLALTVARGSSDHAASYFAYLAMQHAGLPVASLPMSVVTLNRSPLRVAGQAVFAFSQSGQSPDLVDSLRILRERGALG-IALVNAEDSPLEAASEFVVPLCAGAERSVAATKSFIATLSASARLLAHWQR--------DNALLAAGQGLAAGLEQAARLDWSPAIEVL----RDCQRLMVIGRGAGYAIAQEAALKFKETSAIQAEAFSSAEVRHGPMALVEERYPLLVFAPRGPEQEGLLALAEDMRQRGAQVLLAAPDD---IAERDLPLQRAAH--PALDPILAIQSFYVMAAGLAEARGMDPDQPRHLSKVTRTH |
| 2J6H Chain:B ((298-603)) | --------------------------------------------LACGTSYNSGMVSRYWFESLAGIPCDVEIASEFRYRKSAVR-RNSLMITLSQSGETADTLAGLRLSKELGYLGSLAICNVPGSSLVRESDLALMTNAGTEIGVASTKAFTTQLTVLLMLVAKLSRLKGLDASIEHDIVHGLQALPSRIEQM--LSQDKRIEALAEDFSDKHHALFLGRGDQYPIALEGALKLKEISYIHAEAYAAGELKHGPLALIDADMPVIVVAPNNELLEKLKSNIEEVRARGGQLYVFADQDAGFVSSDNMHIIEMPHVEEVIAPIFYTVPLQLLAYHVALIKGTDVDQPRNLAK----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2J6H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -168966 for 2433 contacts (-69.4/contact) +
2D Compatibility (PS) -31155 + (NN) -17530 + (LL) 5076
1D Compatibility (HY) -19600 + (ID) 4800
Total energy: -236975.0 ( -97.40 by residue)
QMean score : 0.570
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