Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKTPEDCTGLADIREAIDRIDLDIVQALGRRMDYVKAASRFKASEAAIPAPERVAAMLPERARWAEENGLDAPFVEGLFAQIIHWYIAEQIKYWRQTRGAA
3RET Chain:A ((1-97))
MKTPEDCTGLADIREAIDRIDLDIVQALGRRMDYVKAASRFEASEAAIPAPERVAAMLPERARWAEENGLDAPFVEGLFAQIIHWYIAEQIKYWRQT----
General information:
TITO was launched using:
RESULT:
Template:
3RET.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26243 for 523 contacts (-50.2/contact) +
2D Compatibility (PS) -10781 + (NN) -6242 + (LL) 216
1D Compatibility (HY) -12800 + (ID) 4800
Total energy: -60650.0 ( -115.97 by residue)
QMean score : 0.594
(partial model without unconserved sides chains):
PDB file :
Tito_3RET.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3RET-query.scw
PDB file :
Tito_Scwrl_3RET.pdb
: