Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MCDAFVGTWKLVSSENFDDYMKEVGVGFATRKVAGMAKPNLIISVEGDLVVIRSESTFKNTEISFKLGVEFDEITPDDRKVKSIITLDGGVLVHVQKWDGKSTTIKKRRDGDKLVVECVMKGVTSTRVYERA
1TOW Chain:A ((1-131))
-CDAFVGTWKLVSSENFDDYMKEVGVGFATRKVAGMAKPNMIISVNGDVITIKSESTFKNTEISFILGQEFDEVTADDRKVKSTITLDGGVLVHVQKWDGKSTTIKRKREDDKLVVECVMKGVTSTRVYERA
General information:
TITO was launched using:
RESULT:
Template:
1TOW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43690 for 967 contacts (-45.2/contact) +
2D Compatibility (PS) -14751 + (NN) -5099 + (LL) 208
1D Compatibility (HY) -16800 + (ID) 5800
Total energy: -85932.0 ( -88.86 by residue)
QMean score : 0.605
(partial model without unconserved sides chains):
PDB file :
Tito_1TOW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TOW-query.scw
PDB file :
Tito_Scwrl_1TOW.pdb
: