Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPNFAGTWKMRSSENFDELLKALGVNAMLRKVAVAAASKPHVEIRQDGDQFYIKTSTTVRTTEINFKVGEGFEEETVDGRKCRSLPTWENENKIHCTQTLLEGDGPKTYWTRELAND-ELILTFGADDVVCTRIYVRE
3CR6 Chain:A ((1-137))
-PNFSGNWKIIRSENFEELLKVLGVNVMLRKIEVAAASKPAVEIKQEGDTFYIKTSTTVRTTEINFKVGEEFEEQTVDGRPCKSLVKWESENKMVCEQKLLKGEGPKTSWTLELTNDGELILTMTADDVVCTKVYVRE
General information:
TITO was launched using:
RESULT:
Template:
3CR6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33792 for 964 contacts (-35.1/contact) +
2D Compatibility (PS) -15339 + (NN) -7534 + (LL) 208
1D Compatibility (HY) -16400 + (ID) 5100
Total energy: -77957.0 ( -80.87 by residue)
QMean score : 0.587
(partial model without unconserved sides chains):
PDB file :
Tito_3CR6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CR6-query.scw
PDB file :
Tito_Scwrl_3CR6.pdb
: