Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLLLLAALLTAGAAAHSISPRAVWQFRNMIKCTIPGSDPLKDYNNYGCYCGLGGWGTPVDDLDRCCQTHDHCYSQAKKLESCKFLIDNPYTNTYSYSCSGSEITCSAKNNKCEDFICNCDREAAICFSKVPYNKEYKNLDTGKFC
3FVI Chain:D ((1-124))
----------------------ALWQFRSMIKCAIPGSHPLMDFNNYGCYCGLGGSGTPVDELDRCCETHDNCYRDAKNLDSCKFLVDNPYTESYSYSCSNTEITCNSKNNACEAFICNCDRNAAICFSKAPYNKEHKNLDTKKYC
General information:
TITO was launched using:
RESULT:
Template:
3FVI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57929 for 925 contacts (-62.6/contact) +
2D Compatibility (PS) -13079 + (NN) -6959 + (LL) 2224
1D Compatibility (HY) -16000 + (ID) 4800
Total energy: -96543.0 ( -104.37 by residue)
QMean score : 0.363
(partial model without unconserved sides chains):
PDB file :
Tito_3FVI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FVI-query.scw
PDB file :
Tito_Scwrl_3FVI.pdb
: