Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLLLLAALLTAGVTAHSISTRAVWQFRNMIKCTIPGSDPLREYNNYGCYCGLGGSGTPVDDLDRCCQTHDHCYNQAKKLESCKFLIDNPYTNTYSYKCSGNVITCSDKNNDCESFICNCDRQAAICFSKVPYNKEYKDLDTKKHC
3FVI Chain:D ((1-124))
----------------------ALWQFRSMIKCAIPGSHPLMDFNNYGCYCGLGGSGTPVDELDRCCETHDNCYRDAKNLDSCKFLVDNPYTESYSYSCSNTEITCNSKNNACEAFICNCDRNAAICFSKAPYNKEHKNLDTKKYC
General information:
TITO was launched using:
RESULT:
Template:
3FVI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57186 for 925 contacts (-61.8/contact) +
2D Compatibility (PS) -12942 + (NN) -5642 + (LL) 2372
1D Compatibility (HY) -15600 + (ID) 4700
Total energy: -93698.0 ( -101.30 by residue)
QMean score : 0.375
(partial model without unconserved sides chains):
PDB file :
Tito_3FVI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FVI-query.scw
PDB file :
Tito_Scwrl_3FVI.pdb
: