Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPPEPKKSRRCVLL
2QRZ Chain:B ((1-189))
MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEP---KKSRRCV--
General information:
TITO was launched using:
RESULT:
Template:
2QRZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -129769 for 1476 contacts (-87.9/contact) +
2D Compatibility (PS) -19462 + (NN) -6617 + (LL) 176
1D Compatibility (HY) -27200 + (ID) 9300
Total energy: -192172.0 ( -130.20 by residue)
QMean score : 0.733
(partial model without unconserved sides chains):
PDB file :
Tito_2QRZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QRZ-query.scw
PDB file :
Tito_Scwrl_2QRZ.pdb
: