Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MACGLVASNLNLKPGECLRVRGEVAPDAKSFVLNLGKDSNNLCLHFNPRFNAHGDANTIVCNSKDGGAWGTEQREAVFPFQPGSVAEVCITFDQANLTVKLPDGYEFKFPNRLNLEAINYMAADGDFKIKCVAFD
1W6P Chain:A ((1-134))
-ASGLVASNLNLKPGE-LRVRGEVAPDAKSFVLNLGKDSNNLCLHFNPRFNAHGDANTIVCNSKDDGAWGTEQREAVFPFQPGSVAEVCITFDQANLTVKLPDGYEFKFPNRLNLEAINYMAADGDFKIKCVAFD
General information:
TITO was launched using:
RESULT:
Template:
1W6P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 29811 for 1002 contacts (29.8/contact) +
2D Compatibility (PS) -13911 + (NN) -217 + (LL) 264
1D Compatibility (HY) 5200 + (ID) 800
Total energy: 20347.0 ( 20.31 by residue)
QMean score : -0.012
(partial model without unconserved sides chains):
PDB file :
Tito_1W6P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W6P-query.scw
PDB file :
Tito_Scwrl_1W6P.pdb
: