Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVVFNGLLKIKICEAVSLKPTAWSLRHAVGPRPQTFLLDPYIALNVDDSRIGQTATKQKTNSPAWHDEFVTDVCNGRKIELAVFHDAPIGYDDFVANCTIQFEELLQNGSRHFEDWIDLEPEGKVYVIIDLSGSSGEAPKDNEERVFRERMRPRKRQGAVRRRVHQVNGHKFMATYLRQPTYCSHCRDFIWGVIGKQGYQCQVCTCVVHKRCHELIITKCAGLKKQETPDEVGSQRFSVNMPHKFGIHNYKVPTFCDHCGSLLWGLLRQGLQCKVCKMNVHRRCETNVAPNCGVDARGIAKVLADLGVTPDKITNSGQRRKKLAAGAESPQPASGNSPSEDDRSKSAPTSPCDQELKELENNIRKALSFDNRGEEHRASSSTDGQLASPGENGEVRQGQAKRLGLDEFNFIKVLGKG-SFGKVMLAELKGK-DEVYAVKVLKKDVILQDDDVDCTMTEKRILALARK-HPYLTQLYCCFQTKDRLFFVMEYVNGGDLMFQIQR-SRKFDEPRSGFYAAEVTSALMFLH-QHGVIYRDLKLDNILLDAEGHS----KLADFGMCKE---GILNGVTTTTFCGTPDYIAPEILQE---LEYGPSVDWWALGVLMYEMMAG-QPPF---EADNEDDLFESILHD------DVLYPVWLSKEAVSILKAFMTKNPHKRLGCVAAQNGEDAIKQHPFFKEID---WVLLEQKKMKPPFKPRIKTKRDVNNFDQDFTREEPILTLVDEAIVKQINQEEFKGFSYFGEDLMP |
| 1CDK Chain:A ((8-350)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KGSEQESVKEFLAKAKEDFLKKWENPAQNTA------H--LDQFERIKTLGT-GSFGRVMLVKHKETG-NHFAMKILDKQKVVKLKQIEHTLNEKRILQAV--NFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHS-LDLIYRDLKPENLLIDQ----QGYIQVTDFGFAKRVKG-RT-----WTLCGTPEYLAPEIILSKGY---NKAVDWWALGVLIYEMAAGY-PPFFAD---QPIQIYEKIVSGKVRFPS------HFSSDLKDLLRNLLQVDLTKRFG--NLKDGVNDIKNHKWFA---TTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRVSI-------NEKCGKEFSEF--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1CDK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -142306 for 2479 contacts (-57.4/contact) +
2D Compatibility (PS) -33678 + (NN) -10625 + (LL) 23980
1D Compatibility (HY) -24800 + (ID) 5700
Total energy: -193129.0 ( -77.91 by residue)
QMean score : 0.215
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