Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLGRCFPPDTKEKQQLRMTKLCDPAESELSPFLITLILAVLLAEYLIGIIANGFIMAIHAAEWVQNKAVSTSGRILVFLSVSRIALQSLMMLEITISSTSLSFYSEDAVYYAFKISFIFLNFCSLWFAAWLSFFYFVKIANFSYPLFLKLRWRITGLIPWLLWLSVFISFSHSMFCINICTVYCNNSFPIHSSNSTKKTYLSEINVVGLAFFFNLGIVTPLIMFILTATLLILSLKRHTLHMGSNATGS--------------NDPSMEAHMGAIKAISYF--LILYIFNAVALFIYLSNMFDINSLWNNLCQIIMAAYPAS----HSILLIQDNPGLRRAWKRLQLRLHLYPKEWTL-------------------- |
1W5C Chain:D ((1-350)) | -----MTIAIGRAPAERGWFDILDDWLKRDRFVFVGWSGILLFPCAY-LALGGWLTGTTFVTSWYTHGLASS-----YLEGCNFLTVAVSTPANSMGHSLLLLWGPEAQ-----------GDFTRWCQLGGLWTFIALHGAFGLIGFMLRQFEIARLVGVRPYNAIAFSAPIAVFVSVF------LIYPLGQSSWFFAPSFGVAAIFRFLLFFQGFHNWTLNPFHMMGVAGVLGGALLCAIHGATVENTLFQDGEGASTFRAFNPTQAEETYSMVTANRFWSQIFGIAFSNKRWLHFFMLFVPVTGLWMSAIGVVGLALNLRSYDFISQEIRAAEDPEFETFYTKNLLLNEGIRAWMAPQDQPHENFVFPEEVLPRGN |
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General information:
TITO was launched using:
| RESULT:
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Template: 1W5C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -184355 for 2147 contacts (-85.9/contact) +
2D Compatibility (PS) -31237 + (NN) -1303 + (LL) 2408
1D Compatibility (HY) -9600 + (ID) 1750
Total energy: -225837.0 ( -105.19 by residue)
QMean score : 0.012
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