Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAKQYDSVECPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVD-------NYELYEKL---ELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDPMPSDLKGMLSTHLTSMFEYLAPPRRKGSQITQQSTNQSRNPATTNQTEFERVF
1V0O Chain:B ((3-284))-----------------KYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRL----------TIREISILKELKHSNIVKLYDVIHTKKR--------LVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIP----VRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKG-------------LDESGIDLLSKMLKLDPNQRITAKQALEHAYFKEN------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1V0O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -174735 for 2053 contacts (-85.1/contact) +
2D Compatibility (PS) -27736 + (NN) -7433 + (LL) 5264
1D Compatibility (HY) -31200 + (ID) 5950
Total energy: -241790.0 ( -117.77 by residue)
QMean score : 0.480

(partial model without unconserved sides chains):
PDB file : Tito_1V0O.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1V0O-query.scw
PDB file : Tito_Scwrl_1V0O.pdb: