Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
IDCGHVDSLVRPCLSYVQG---GPG----PSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIH---NL----------NEDNARSIPPKCGVNLPYTISLNIDCSRV
1HSS Chain:A ((15-106))
-------PALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHIS--------EWCRCGALYSMLDSMYKEH--GAFPRCRREVVKLTAASITAVCRLPIVVD----------
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45440 for 399 contacts (-113.9/contact) +
2D Compatibility (PS) -6312 + (NN) -2292 + (LL) 1260
1D Compatibility (HY) -5600 + (ID) 500
Total energy: -58884.0 ( -147.58 by residue)
QMean score : 0.343
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: