Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AISCGQVTSALSPCISYARGNG---A------------NPPAACCSGVRSLAGAARSTADKQAACKC--IKSAAGGL-------------NAGKAAGIPSKCGVSVPYAISSSVDCSKIR
1SM7 Chain:A ((13-101))
--------QHLRACQQWIRQQLAGSPFSENQWGPQQGPSLREQCCNELYQE--------DQV--CVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLPNVCNMKQI-------------
General information:
TITO was launched using:
RESULT:
Template:
1SM7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27883 for 398 contacts (-70.1/contact) +
2D Compatibility (PS) -6098 + (NN) -696 + (LL) 2252
1D Compatibility (HY) -4000 + (ID) 700
Total energy: -37125.0 ( -93.28 by residue)
QMean score : 0.396
(partial model without unconserved sides chains):
PDB file :
Tito_1SM7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SM7-query.scw
PDB file :
Tito_Scwrl_1SM7.pdb
: