Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ITCGQVNSAVGPCLTYARGGAGPSAACCSGVRSLKAAASTTADRRTACNCL--KNA-ARGIKGLNAGNAASIPSKCGVSVPYTISASIDCSRVS
1L6H Chain:A ((6-66))
-------GQLTVCTGAIAGGARPTAACCSSLRA-----------QQGCFCQFAKDPRYGR--YVNSPNARKAVSSCGIALP-------------
General information:
TITO was launched using:
RESULT:
Template:
1L6H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21924 for 381 contacts (-57.5/contact) +
2D Compatibility (PS) -6261 + (NN) -3787 + (LL) 2412
1D Compatibility (HY) -2800 + (ID) 1050
Total energy: -33410.0 ( -87.69 by residue)
QMean score : 0.208
(partial model without unconserved sides chains):
PDB file :
Tito_1L6H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1L6H-query.scw
PDB file :
Tito_Scwrl_1L6H.pdb
: