Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AITCGQVGSAIAPCISYVTGRSGLTQGCCNGVKGLNNAARTTADRQAACRCLKSLAGSI-KSLNLGTVAGVPGKCGVNVGFPISLSTDCNKVS
1L6H Chain:A ((6-66))
--------GQLTVCTGAIAGGARPTAACCSSLRA-----------QQGCFCQFAKDPRYGRYVNSPNARKAVSSCGIALP-------------
General information:
TITO was launched using:
RESULT:
Template:
1L6H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27893 for 409 contacts (-68.2/contact) +
2D Compatibility (PS) -6085 + (NN) 129 + (LL) 1596
1D Compatibility (HY) -2000 + (ID) 550
Total energy: -34803.0 ( -85.09 by residue)
QMean score : 0.123
(partial model without unconserved sides chains):
PDB file :
Tito_1L6H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1L6H-query.scw
PDB file :
Tito_Scwrl_1L6H.pdb
: