Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LTPCEEATNLLTPCLRYLWAP----PEAK----PSPECCSGLDKVNKGVKTYDDRHDMCICLSSEA-AIT---S---------A-----D----QYKFDNLPKLCNVALFAPVGPKFDCSTIKV
1B1U Chain:A ((15-109))
--------NPLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAI--------PAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAPKLVTEVECNLATIH-------------
General information:
TITO was launched using:
RESULT:
Template:
1B1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24016 for 415 contacts (-57.9/contact) +
2D Compatibility (PS) -6264 + (NN) 1297 + (LL) 1084
1D Compatibility (HY) -1200 + (ID) 550
Total energy: -29649.0 ( -71.44 by residue)
QMean score : 0.138
(partial model without unconserved sides chains):
PDB file :
Tito_1B1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B1U-query.scw
PDB file :
Tito_Scwrl_1B1U.pdb
: