Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AISCGAVTGSLGQCYNYLTR---GGF----IPRGCCSGVQRLNSLARTTRDRQQACRCIQGAARALG---SRL----------NAGRAARLPGACRVRISYPISARTNCNTVR
1HSS Chain:A ((15-108))
--------PALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI--------SEWCRCGALYSMLDSMYKEH---GAFPRCRREVVKLTAASITAVCRLPIVVDAS---------
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53263 for 405 contacts (-131.5/contact) +
2D Compatibility (PS) -6734 + (NN) -1200 + (LL) 1892
1D Compatibility (HY) -5200 + (ID) 700
Total energy: -65205.0 ( -161.00 by residue)
QMean score : 0.335
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: