Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-----------------------------------------ATTACVPTQLTPCAPAIVGNAAPTAACCARLKAHPASC-FCQYKKNPNMQRYVNSPNGKKVFAACKVPLPKC--------------------------------------------------------------------
1WLJ Chain:A ((6-178))
EVVAMDCEMVGLGPHRESGLARCSLVNVHGAVLYDKFIRPEGEITDYRTRVSGVTPQHMVGATPFAVARLEILQLLKGKLVVGH-------------DLKHDFQALKEDMSGYTIYDTSTDRLLWREAKLVSLRVLSERLLHKSIQNSLLGHSSVEDARATMELYQISQRIRARRGLPRLA
General information:
TITO was launched using:
RESULT:
Template:
1WLJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14785 for 269 contacts (-55.0/contact) +
2D Compatibility (PS) -6407 + (NN) -6583 + (LL) 292
1D Compatibility (HY) -1200 + (ID) 450
Total energy: -29133.0 ( -108.30 by residue)
QMean score : 0.432
(partial model without unconserved sides chains):
PDB file :
Tito_1WLJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WLJ-query.scw
PDB file :
Tito_Scwrl_1WLJ.pdb
: