Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--------------KTLILGEEVKATCDFTKFQVC---------KPEIITGS---------PPS-------------EECCEKLKEQQSCLCAY----------LISPSISQYIGNAKRVIRAC-GIPFPNCS-----------------------
1IV1 Chain:A ((2-151))
RIGYGEDSHRLEEGRPLYLCG-LLIPSPVGALAHSDGDAALHALTDALLSAYGLGDIGLLFPDTDPRWRGERSEVFLREALRLVEAR-----GAKLLQASLVLTLDRPKLGPHRKALVDSLSRLLRLPQDRIGLTFKTSEGLAPSHVQARAVVLLD
General information:
TITO was launched using:
RESULT:
Template:
1IV1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17709 for 353 contacts (-50.2/contact) +
2D Compatibility (PS) -7565 + (NN) -4385 + (LL) 484
1D Compatibility (HY) -2400 + (ID) 350
Total energy: -31925.0 ( -90.44 by residue)
QMean score : 0.334
(partial model without unconserved sides chains):
PDB file :
Tito_1IV1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IV1-query.scw
PDB file :
Tito_Scwrl_1IV1.pdb
: