Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ICNLSDAGLQACKPAAAVR-----NPADTPSSECCDALAAADLPCLCRYKGSAGARVW--VRFYGID---------LNRAMTLPGKCGLTLPAHC
1HSS Chain:A ((15-106))
------PALPACRPLLRLQCNGSQVPE-AVLRDCCQQLAHISEWCRCGALYSMLDSMYKEH----GAFPRCRREVVKLTAASITAVCRLPIVVD-
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21053 for 438 contacts (-48.1/contact) +
2D Compatibility (PS) -7199 + (NN) -2598 + (LL) 384
1D Compatibility (HY) -2800 + (ID) 750
Total energy: -34016.0 ( -77.66 by residue)
QMean score : 0.314
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: